1
.gitignore
vendored
1
.gitignore
vendored
@@ -3,3 +3,4 @@
|
||||
CMakeFiles
|
||||
cmake-build*
|
||||
*.swp
|
||||
main
|
||||
|
||||
@@ -5,3 +5,5 @@ add_subdirectory(common)
|
||||
|
||||
add_subdirectory(cpu-slo)
|
||||
add_subdirectory(cpu-opt)
|
||||
|
||||
add_subdirectory(gpu-slo)
|
||||
|
||||
6
gpu-opt/CMakeLists.txt
Normal file
6
gpu-opt/CMakeLists.txt
Normal file
@@ -0,0 +1,6 @@
|
||||
cmake_minimum_required(VERSION 3.8 FATAL_ERROR)
|
||||
project(main LANGUAGES CXX CUDA)
|
||||
|
||||
add_executable(main main.cu)
|
||||
target_compile_features(main PUBLIC cxx_std_11)
|
||||
set_target_properties(main PROPERTIES CUDA_SEPARABLE_COMPILATION ON)
|
||||
9
gpu-opt/Makefile
Normal file
9
gpu-opt/Makefile
Normal file
@@ -0,0 +1,9 @@
|
||||
main : main.cu util.h
|
||||
nvcc -o main -std=c++11 -O3 main.cu
|
||||
|
||||
clean :
|
||||
rm main
|
||||
|
||||
queue : main
|
||||
qsub -q mamba -l walltime=24:00:00 -l nodes=1:ppn=1:gpus=1 -d `pwd` run_gpu_opt.sh
|
||||
|
||||
127
gpu-opt/groups.h
Normal file
127
gpu-opt/groups.h
Normal file
@@ -0,0 +1,127 @@
|
||||
#pragma once
|
||||
|
||||
#include "util.h"
|
||||
|
||||
#include <iostream>
|
||||
|
||||
/*
|
||||
* Order 4*res*res
|
||||
*/
|
||||
Coxeter torus(int res) {
|
||||
return make_coxeter(4, {
|
||||
{0, 1, res},
|
||||
{2, 3, res},
|
||||
});
|
||||
}
|
||||
|
||||
Coxeter hypercube(int dim) {
|
||||
std::vector<Rel> rels;
|
||||
rels.push_back({0, 1, 4});
|
||||
for (int d = 2; d < dim; d++) {
|
||||
rels.push_back({d-1, d, 3});
|
||||
}
|
||||
return make_coxeter(dim, rels);
|
||||
}
|
||||
|
||||
/*
|
||||
* Order 14,400
|
||||
*/
|
||||
Coxeter H4() {
|
||||
return make_coxeter(4, {
|
||||
{0, 1, 5},
|
||||
{1, 2, 3},
|
||||
{2, 3, 3},
|
||||
});
|
||||
}
|
||||
|
||||
/*
|
||||
* Order 51,840
|
||||
*/
|
||||
Coxeter E6() {
|
||||
return make_coxeter(6, {
|
||||
{0, 1, 3},
|
||||
{1, 2, 3},
|
||||
{2, 3, 3},
|
||||
{2, 4, 3},
|
||||
{4, 5, 3},
|
||||
});
|
||||
}
|
||||
|
||||
/*
|
||||
* Order 2,903,040
|
||||
*/
|
||||
Coxeter E7() {
|
||||
return make_coxeter(7, {
|
||||
{0, 1, 3},
|
||||
{1, 2, 3},
|
||||
{2, 3, 3},
|
||||
{2, 4, 3},
|
||||
{4, 5, 3},
|
||||
{5, 6, 3},
|
||||
});
|
||||
}
|
||||
|
||||
/*
|
||||
* Order 696,729,600
|
||||
*/
|
||||
Coxeter E8() {
|
||||
return make_coxeter(8, {
|
||||
{0, 1, 3},
|
||||
{1, 2, 3},
|
||||
{2, 3, 3},
|
||||
{2, 4, 3},
|
||||
{4, 5, 3},
|
||||
{5, 6, 3},
|
||||
{6, 7, 3},
|
||||
});
|
||||
}
|
||||
|
||||
/*
|
||||
* returns coxeter group based on the arguments
|
||||
* prints out type and arguments, without an endline
|
||||
*/
|
||||
Coxeter proc_args(int argc, const char* argv[]) {
|
||||
if (argc < 2) {
|
||||
std::cerr << "missing type argument." << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
|
||||
int type = std::strtol(argv[1], nullptr, 10);
|
||||
std::cout << type << ',';
|
||||
|
||||
int arg;
|
||||
switch (type) {
|
||||
case 0:
|
||||
if (argc < 3) {
|
||||
std::cerr << "Must provide a size for torus!" << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
arg = std::strtol(argv[2], nullptr, 10);
|
||||
std::cout << arg << ',';
|
||||
return torus(arg);
|
||||
case 1:
|
||||
std::cout << -1 << ',';
|
||||
return H4();
|
||||
case 2:
|
||||
std::cout << -1 << ',';
|
||||
return E6();
|
||||
case 3:
|
||||
std::cout << -1 << ',';
|
||||
return E7();
|
||||
case 4:
|
||||
std::cout << -1 << ',';
|
||||
return E8();
|
||||
case 5:
|
||||
if (argc < 3) {
|
||||
std::cerr << "Must provide a dimension for hypercube!" << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
arg = std::strtol(argv[2], nullptr, 10);
|
||||
std::cout << arg << ',';
|
||||
return hypercube(arg);
|
||||
}
|
||||
|
||||
std::cerr << "Not a valid type!" << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
|
||||
245
gpu-opt/main.cu
Normal file
245
gpu-opt/main.cu
Normal file
@@ -0,0 +1,245 @@
|
||||
#include <thrust/device_vector.h>
|
||||
#include <thrust/host_vector.h>
|
||||
#include <thrust/logical.h>
|
||||
|
||||
#include <vector>
|
||||
#include <iostream>
|
||||
#include <chrono>
|
||||
|
||||
#include "util.h"
|
||||
#include "groups.h"
|
||||
|
||||
__constant__ Rel c_rels[128];
|
||||
__constant__ int c_nrels[1];
|
||||
__constant__ int c_ngens[1];
|
||||
|
||||
struct Row {
|
||||
int rel;
|
||||
|
||||
int l, r;
|
||||
|
||||
int from, to;
|
||||
|
||||
__host__ __device__
|
||||
Row() : rel(0), l(0), r(0), from(0), to(0) {}
|
||||
|
||||
__device__
|
||||
Row(int rel, int cos, int size) {
|
||||
l = 0;
|
||||
r = size - 1;
|
||||
|
||||
from = to = cos;
|
||||
|
||||
this->rel = rel;
|
||||
}
|
||||
};
|
||||
|
||||
std::ostream &operator<<(std::ostream &o, const Row &r) {
|
||||
return o << "Row[" << r.rel << "]{" << r.l << ":" << r.from << "-" << r.to << ":" << r.r << "}";
|
||||
}
|
||||
|
||||
// this performs a pass on one relation table row, applying learned data to the coset table.
|
||||
struct Solver {
|
||||
int *cosets;
|
||||
|
||||
Solver(thrust::device_vector<int> &cosets)
|
||||
: cosets(thrust::raw_pointer_cast(cosets.data())) {
|
||||
}
|
||||
|
||||
__device__
|
||||
void operator()(Row &drow) {
|
||||
Row row = drow;
|
||||
|
||||
if (row.r - row.l <= 0) {
|
||||
return;
|
||||
}
|
||||
|
||||
while (row.r - row.l > 0) {
|
||||
int gen = c_rels[row.rel].gens[row.l & 1];
|
||||
int next = cosets[row.from * c_ngens[0] + gen];
|
||||
if (next < 0) break;
|
||||
row.l++;
|
||||
row.from = next;
|
||||
}
|
||||
|
||||
while (row.r - row.l > 0) {
|
||||
int gen = c_rels[row.rel].gens[row.r & 1];
|
||||
int next = cosets[row.to * c_ngens[0] + gen];
|
||||
if (next < 0) break;
|
||||
row.r--;
|
||||
row.to = next;
|
||||
}
|
||||
|
||||
drow = row;
|
||||
|
||||
if (row.r - row.l <= 0) {
|
||||
int gen = c_rels[row.rel].gens[row.l & 1];
|
||||
cosets[row.from * c_ngens[0] + gen] = row.to;
|
||||
cosets[row.to * c_ngens[0] + gen] = row.from;
|
||||
return;
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
// this sets the inital row in the coset table based on the subgroup generators
|
||||
struct CosetInitializer {
|
||||
int *cosets;
|
||||
|
||||
CosetInitializer(thrust::device_vector<int> &cosets)
|
||||
: cosets(thrust::raw_pointer_cast(cosets.data())) {
|
||||
}
|
||||
|
||||
__device__
|
||||
void operator()(int gen) {
|
||||
cosets[gen] = 0;
|
||||
}
|
||||
};
|
||||
|
||||
// this creates rows for cosets by index of each relation table
|
||||
struct RowGen {
|
||||
int coset;
|
||||
|
||||
RowGen(int coset)
|
||||
: coset(coset) {
|
||||
}
|
||||
|
||||
__device__
|
||||
Row operator()(int rel) {
|
||||
return Row(rel, coset, c_rels[rel].mul * 2);
|
||||
}
|
||||
};
|
||||
|
||||
// determines if rows are incomplete; used to remove completed rows
|
||||
struct RowIncomplete {
|
||||
__device__
|
||||
bool operator()(Row r) {
|
||||
return r.r - r.l > 1;
|
||||
}
|
||||
};
|
||||
|
||||
// add a row to the coset table filled with -1
|
||||
void add_row(
|
||||
int ngens,
|
||||
thrust::device_vector<int> &cosets) {
|
||||
cosets.resize(cosets.size() + ngens, -1);
|
||||
};
|
||||
|
||||
// add a new coset to the coset table, picking up where the last call left off.
|
||||
bool add_coset(
|
||||
int ngens,
|
||||
int *coset,
|
||||
int *hint,
|
||||
thrust::device_vector<int> &dcosets) {
|
||||
int offset = *hint;
|
||||
thrust::host_vector<int> cosets(dcosets.begin() + offset, dcosets.end());
|
||||
*coset = dcosets.size() / ngens;
|
||||
|
||||
while (cosets[*hint - offset] >= 0) {
|
||||
*hint = *hint + 1;
|
||||
if (*hint - offset >= cosets.size())
|
||||
return true;
|
||||
}
|
||||
int from = *hint / ngens;
|
||||
int gen = *hint % ngens;
|
||||
|
||||
add_row(ngens, dcosets);
|
||||
|
||||
dcosets[*hint] = *coset;
|
||||
dcosets[*coset * ngens + gen] = from;
|
||||
|
||||
return false;
|
||||
}
|
||||
|
||||
// add a row for each relation table for some coset
|
||||
void gen_rows(
|
||||
int coset,
|
||||
int nrels,
|
||||
thrust::device_vector<Row> &rows) {
|
||||
rows.resize(rows.size() + nrels);
|
||||
|
||||
thrust::counting_iterator<int> counter(0);
|
||||
thrust::transform(
|
||||
thrust::device,
|
||||
counter, counter + nrels,
|
||||
rows.end() - nrels,
|
||||
RowGen(coset));
|
||||
}
|
||||
|
||||
// do everything. data is implicitly passed to the device via device_vector.
|
||||
thrust::device_vector<int> solve(
|
||||
int ngens,
|
||||
int nrels,
|
||||
thrust::device_vector<int> subs) {
|
||||
|
||||
thrust::device_vector<int> cosets;
|
||||
thrust::device_vector<Row> rows;
|
||||
|
||||
// create the inital row and populate it from subs
|
||||
add_row(ngens, cosets);
|
||||
thrust::for_each(
|
||||
thrust::device,
|
||||
subs.begin(), subs.end(),
|
||||
CosetInitializer(cosets));
|
||||
|
||||
// generate initial relation table rows for coset 0
|
||||
gen_rows(0, nrels, rows);
|
||||
|
||||
// these keep track of what progress has been made
|
||||
int coset = 0;
|
||||
int hint = 0;
|
||||
|
||||
// will break out later
|
||||
while (true) {
|
||||
// create a solver and apply it until nothing is being learned
|
||||
Solver solve(cosets);
|
||||
thrust::for_each(
|
||||
thrust::device,
|
||||
rows.begin(), rows.end(),
|
||||
solve);
|
||||
|
||||
// fails if hint passes the end of the table. in that case, break.
|
||||
bool done = add_coset(
|
||||
ngens,
|
||||
&coset, &hint,
|
||||
cosets);
|
||||
if (done) break;
|
||||
|
||||
// generate relation table rows for new coset
|
||||
gen_rows(coset, nrels, rows);
|
||||
|
||||
// move completed rows to the end of the list and remove.
|
||||
auto cut = thrust::partition(
|
||||
thrust::device,
|
||||
rows.begin(), rows.end(),
|
||||
RowIncomplete());
|
||||
rows.erase(cut, rows.end());
|
||||
}
|
||||
|
||||
return cosets;
|
||||
}
|
||||
|
||||
|
||||
int main(int argc, const char* argv[]) {
|
||||
Coxeter cox;
|
||||
cox = proc_args(argc, argv);
|
||||
std::vector<int> subs = {};
|
||||
int nrels = cox.rels.size();
|
||||
int ngens = cox.ngens;
|
||||
|
||||
cudaMemcpyToSymbol(c_ngens, &ngens, sizeof(int));
|
||||
cudaMemcpyToSymbol(c_nrels, &nrels, sizeof(int));
|
||||
cudaMemcpyToSymbol(c_rels, cox.rels.data(), cox.rels.size() * sizeof(Rel));
|
||||
|
||||
auto s = std::chrono::system_clock::now();
|
||||
thrust::host_vector<int> cosets = solve(cox.ngens, nrels, subs);
|
||||
auto e = std::chrono::system_clock::now();
|
||||
|
||||
std::chrono::duration<float> diff = e - s;
|
||||
int order = cosets.size() / cox.ngens;
|
||||
|
||||
// type, arg, ngens, time, order
|
||||
std::cout << cox.ngens << ',' << diff.count() << ',' << order << std::endl;
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
39
gpu-opt/run_gpu_opt.sh
Normal file
39
gpu-opt/run_gpu_opt.sh
Normal file
@@ -0,0 +1,39 @@
|
||||
MAIN='./main'
|
||||
|
||||
echo "type,arg,nrels,secs,cosets"
|
||||
|
||||
TYPE=0
|
||||
for ARG in $(seq 25 25 250); do
|
||||
$MAIN $TYPE $ARG
|
||||
done
|
||||
|
||||
TYPE=5
|
||||
for ARG in $(seq 2 5); do
|
||||
$MAIN $TYPE $ARG
|
||||
done
|
||||
|
||||
TYPE=1
|
||||
$MAIN $TYPE
|
||||
|
||||
TYPE=5
|
||||
$MAIN $TYPE 6
|
||||
|
||||
TYPE=2
|
||||
$MAIN $TYPE
|
||||
|
||||
TYPE=5
|
||||
$MAIN $TYPE 7
|
||||
|
||||
TYPE=3
|
||||
$MAIN $TYPE
|
||||
|
||||
TYPE=5
|
||||
$MAIN $TYPE 8
|
||||
$MAIN $TYPE 9
|
||||
|
||||
TYPE=4
|
||||
$MAIN $TYPE
|
||||
|
||||
TYPE=5
|
||||
$MAIN $TYPE 10
|
||||
|
||||
104
gpu-opt/tests.cu
Normal file
104
gpu-opt/tests.cu
Normal file
@@ -0,0 +1,104 @@
|
||||
//#include <cstdio>
|
||||
//#include <cstdlib>
|
||||
//
|
||||
//#include <thrust/host_vector.h>
|
||||
//#include <thrust/device_vector.h>
|
||||
//#include <thrust/sequence.h>
|
||||
//
|
||||
//#define N 50
|
||||
//
|
||||
//__global__
|
||||
//void vector_add(float* out, float* a, float* b, int n) {
|
||||
// for(int i = 0; i < n; i++){
|
||||
// out[i] = a[i] + b[i];
|
||||
// }
|
||||
//}
|
||||
//
|
||||
//int main(){
|
||||
// thrust::host_vector<float> a(N);
|
||||
// thrust::sequence(a.begin(), a.end());
|
||||
//
|
||||
// thrust::host_vector<float> b(N);
|
||||
// thrust::sequence(b.begin(), b.end());
|
||||
// thrust::reverse(b.begin(), b.end());
|
||||
//
|
||||
// for (int i = 0; i < N; ++i) {
|
||||
// printf("%.1f ", a[i]);
|
||||
// } printf("\n");
|
||||
//
|
||||
// for (int i = 0; i < N; ++i) {
|
||||
// printf("%.1f ", b[i]);
|
||||
// } printf("\n");
|
||||
//
|
||||
// thrust::device_vector<float> aD = a;
|
||||
// thrust::device_vector<float> bD = b;
|
||||
// thrust::device_vector<float> outD(N);
|
||||
//
|
||||
// vector_add<<<1, 1>>>(
|
||||
// thrust::raw_pointer_cast(&outD[0]),
|
||||
// thrust::raw_pointer_cast(&aD[0]),
|
||||
// thrust::raw_pointer_cast(&bD[0]),
|
||||
// N);
|
||||
//
|
||||
// thrust::host_vector<float> out = outD;
|
||||
//
|
||||
// for (int i = 0; i < N; ++i) {
|
||||
// printf("%.1f ", out[i]);
|
||||
// } printf("\n");
|
||||
//
|
||||
// return 0;
|
||||
//}
|
||||
|
||||
#include <cstdio>
|
||||
#include <cstdlib>
|
||||
#include <chrono>
|
||||
|
||||
#include <thrust/device_vector.h>
|
||||
#include <thrust/host_vector.h>
|
||||
#include <thrust/sequence.h>
|
||||
|
||||
void add_proc(int *c, int *a, int *b) {
|
||||
*c = *a + *b;
|
||||
}
|
||||
|
||||
void test_proc(){
|
||||
int a = 0;
|
||||
int b = 1;
|
||||
|
||||
auto start = std::chrono::system_clock::now();
|
||||
|
||||
for (int i = 0; i < 1000000; ++i) {
|
||||
add_proc(&a, &a, &b);
|
||||
}
|
||||
|
||||
auto end = std::chrono::system_clock::now();
|
||||
|
||||
std::chrono::duration<float, std::micro> diff = end - start;
|
||||
|
||||
printf("proc: %d: 1B in %.3f micro\n", a, diff.count());
|
||||
}
|
||||
|
||||
__global__
|
||||
void add_gpu(int *c, int *a, int *b) {
|
||||
*c = *a + *b;
|
||||
}
|
||||
|
||||
void test_gpu(){
|
||||
thrust::device_vector<int> vals(2, 0);
|
||||
vals[0] = 0;
|
||||
vals[1] = 1;
|
||||
printf(" gpu: %d: 1B in %.3f micro\n", vals[0], 0.0f);
|
||||
|
||||
int *a = thrust::raw_pointer_cast(&vals[0]);
|
||||
int *b = thrust::raw_pointer_cast(&vals[1]);
|
||||
|
||||
add_gpu<<<1, 1>>>(a, a, a);
|
||||
|
||||
printf(" gpu: %d: 1B in %.3f micro\n", vals[0], 0.0f);
|
||||
}
|
||||
|
||||
int main(int argc, char *argv[]) {
|
||||
test_proc();
|
||||
test_gpu();
|
||||
}
|
||||
|
||||
63
gpu-opt/util.h
Normal file
63
gpu-opt/util.h
Normal file
@@ -0,0 +1,63 @@
|
||||
#pragma once
|
||||
|
||||
#include <thrust/device_vector.h>
|
||||
#include <thrust/host_vector.h>
|
||||
#include <vector>
|
||||
#include <iostream>
|
||||
|
||||
template<class T>
|
||||
std::ostream &operator<<(std::ostream &o, const thrust::host_vector<T> &vec) {
|
||||
if (vec.size() == 0 || vec.size() > 15)
|
||||
return o << "host_vector{size=" << vec.size() << "}";
|
||||
|
||||
o << "[";
|
||||
|
||||
for (int i = 0; i < vec.size() - 1; i++) o << vec[i] << ", ";
|
||||
|
||||
if (vec.size() > 0) o << vec[vec.size() - 1];
|
||||
|
||||
o << "]";
|
||||
|
||||
return o;
|
||||
}
|
||||
|
||||
template<class T>
|
||||
std::ostream &operator<<(std::ostream &o, const thrust::device_vector<T> &vec) {
|
||||
return o << "device_vector{size=" << vec.size() << "}";
|
||||
}
|
||||
|
||||
struct Rel {
|
||||
int gens[2];
|
||||
int mul;
|
||||
};
|
||||
|
||||
struct Coxeter {
|
||||
int ngens;
|
||||
std::vector<Rel> rels;
|
||||
};
|
||||
|
||||
Coxeter make_coxeter(int ngens, const std::vector<Rel> &rels) {
|
||||
int mults[ngens][ngens];
|
||||
|
||||
for (int i = 0; i < ngens; i++) {
|
||||
for (int j = 0; j < ngens; j++) {
|
||||
mults[i][j] = 2;
|
||||
mults[j][i] = 2;
|
||||
}
|
||||
}
|
||||
|
||||
for (const auto &r : rels) {
|
||||
mults[r.gens[0]][r.gens[1]] = r.mul;
|
||||
mults[r.gens[1]][r.gens[0]] = r.mul;
|
||||
}
|
||||
|
||||
std::vector<Rel> res;
|
||||
|
||||
for (int i = 0; i < ngens; i++) {
|
||||
for (int j = i + 1; j < ngens; j++) {
|
||||
res.push_back({i, j, mults[i][j]});
|
||||
}
|
||||
}
|
||||
|
||||
return {ngens, res};
|
||||
}
|
||||
6
gpu-slo/CMakeLists.txt
Normal file
6
gpu-slo/CMakeLists.txt
Normal file
@@ -0,0 +1,6 @@
|
||||
cmake_minimum_required(VERSION 3.8 FATAL_ERROR)
|
||||
project(main LANGUAGES CXX CUDA)
|
||||
|
||||
add_executable(main main.cu)
|
||||
target_compile_features(main PUBLIC cxx_std_11)
|
||||
set_target_properties(main PROPERTIES CUDA_SEPARABLE_COMPILATION ON)
|
||||
9
gpu-slo/Makefile
Normal file
9
gpu-slo/Makefile
Normal file
@@ -0,0 +1,9 @@
|
||||
main : main.cu util.h
|
||||
nvcc -o main -std=c++11 -O3 main.cu
|
||||
|
||||
clean :
|
||||
rm main
|
||||
|
||||
queue : main
|
||||
qsub -q mamba -l walltime=24:00:00 -l nodes=1:ppn=1:gpus=1 -d `pwd` run_gpu.sh
|
||||
|
||||
127
gpu-slo/groups.h
Normal file
127
gpu-slo/groups.h
Normal file
@@ -0,0 +1,127 @@
|
||||
#pragma once
|
||||
|
||||
#include "util.h"
|
||||
|
||||
#include <iostream>
|
||||
|
||||
/*
|
||||
* Order 4*res*res
|
||||
*/
|
||||
Coxeter torus(int res) {
|
||||
return make_coxeter(4, {
|
||||
{0, 1, res},
|
||||
{2, 3, res},
|
||||
});
|
||||
}
|
||||
|
||||
Coxeter hypercube(int dim) {
|
||||
std::vector<Rel> rels;
|
||||
rels.push_back({0, 1, 4});
|
||||
for (int d = 2; d < dim; d++) {
|
||||
rels.push_back({d-1, d, 3});
|
||||
}
|
||||
return make_coxeter(dim, rels);
|
||||
}
|
||||
|
||||
/*
|
||||
* Order 14,400
|
||||
*/
|
||||
Coxeter H4() {
|
||||
return make_coxeter(4, {
|
||||
{0, 1, 5},
|
||||
{1, 2, 3},
|
||||
{2, 3, 3},
|
||||
});
|
||||
}
|
||||
|
||||
/*
|
||||
* Order 51,840
|
||||
*/
|
||||
Coxeter E6() {
|
||||
return make_coxeter(6, {
|
||||
{0, 1, 3},
|
||||
{1, 2, 3},
|
||||
{2, 3, 3},
|
||||
{2, 4, 3},
|
||||
{4, 5, 3},
|
||||
});
|
||||
}
|
||||
|
||||
/*
|
||||
* Order 2,903,040
|
||||
*/
|
||||
Coxeter E7() {
|
||||
return make_coxeter(7, {
|
||||
{0, 1, 3},
|
||||
{1, 2, 3},
|
||||
{2, 3, 3},
|
||||
{2, 4, 3},
|
||||
{4, 5, 3},
|
||||
{5, 6, 3},
|
||||
});
|
||||
}
|
||||
|
||||
/*
|
||||
* Order 696,729,600
|
||||
*/
|
||||
Coxeter E8() {
|
||||
return make_coxeter(8, {
|
||||
{0, 1, 3},
|
||||
{1, 2, 3},
|
||||
{2, 3, 3},
|
||||
{2, 4, 3},
|
||||
{4, 5, 3},
|
||||
{5, 6, 3},
|
||||
{6, 7, 3},
|
||||
});
|
||||
}
|
||||
|
||||
/*
|
||||
* returns coxeter group based on the arguments
|
||||
* prints out type and arguments, without an endline
|
||||
*/
|
||||
Coxeter proc_args(int argc, const char* argv[]) {
|
||||
if (argc < 2) {
|
||||
std::cerr << "missing type argument." << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
|
||||
int type = std::strtol(argv[1], nullptr, 10);
|
||||
std::cout << type << ',';
|
||||
|
||||
int arg;
|
||||
switch (type) {
|
||||
case 0:
|
||||
if (argc < 3) {
|
||||
std::cerr << "Must provide a size for torus!" << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
arg = std::strtol(argv[2], nullptr, 10);
|
||||
std::cout << arg << ',';
|
||||
return torus(arg);
|
||||
case 1:
|
||||
std::cout << -1 << ',';
|
||||
return H4();
|
||||
case 2:
|
||||
std::cout << -1 << ',';
|
||||
return E6();
|
||||
case 3:
|
||||
std::cout << -1 << ',';
|
||||
return E7();
|
||||
case 4:
|
||||
std::cout << -1 << ',';
|
||||
return E8();
|
||||
case 5:
|
||||
if (argc < 3) {
|
||||
std::cerr << "Must provide a dimension for hypercube!" << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
arg = std::strtol(argv[2], nullptr, 10);
|
||||
std::cout << arg << ',';
|
||||
return hypercube(arg);
|
||||
}
|
||||
|
||||
std::cerr << "Not a valid type!" << std::endl;
|
||||
exit(EXIT_FAILURE);
|
||||
}
|
||||
|
||||
281
gpu-slo/main.cu
Normal file
281
gpu-slo/main.cu
Normal file
@@ -0,0 +1,281 @@
|
||||
#include <thrust/device_vector.h>
|
||||
#include <thrust/host_vector.h>
|
||||
#include <thrust/logical.h>
|
||||
|
||||
#include <vector>
|
||||
#include <iostream>
|
||||
#include <chrono>
|
||||
|
||||
#include "util.h"
|
||||
#include "groups.h"
|
||||
|
||||
struct Row {
|
||||
int rel;
|
||||
|
||||
int l, r;
|
||||
|
||||
int from, to;
|
||||
|
||||
bool learning;
|
||||
|
||||
__host__ __device__
|
||||
Row() : rel(0), l(0), r(0), from(0), to(0), learning(true) {}
|
||||
|
||||
__device__
|
||||
Row(int rel, int cos, int size) {
|
||||
l = 0;
|
||||
r = size - 1;
|
||||
|
||||
from = to = cos;
|
||||
|
||||
this->rel = rel;
|
||||
|
||||
learning = true;
|
||||
}
|
||||
};
|
||||
|
||||
std::ostream &operator<<(std::ostream &o, const Row &r) {
|
||||
return o << "Row[" << r.rel << "]{" << r.l << ":" << r.from << "-" << r.to << ":" << r.r << "}(" << r.learning << ")";
|
||||
}
|
||||
|
||||
// this performs a pass on one relation table row, applying learned data to the coset table.
|
||||
struct Solver {
|
||||
int ngens;
|
||||
int *cosets;
|
||||
Rel *rels;
|
||||
|
||||
Solver(int ngens,
|
||||
thrust::device_vector<int> &cosets,
|
||||
thrust::device_vector<Rel> &rels)
|
||||
: ngens(ngens),
|
||||
cosets(thrust::raw_pointer_cast(cosets.data())),
|
||||
rels(thrust::raw_pointer_cast(rels.data())) {
|
||||
}
|
||||
|
||||
__device__
|
||||
void operator()(Row &r) {
|
||||
if (r.r - r.l <= 0) {
|
||||
r.learning = false;
|
||||
return;
|
||||
}
|
||||
|
||||
while (r.r - r.l > 0) {
|
||||
int gen = rels[r.rel].gens[r.l & 1];
|
||||
int next = cosets[r.from * ngens + gen];
|
||||
if (next < 0) break;
|
||||
r.l++;
|
||||
r.from = next;
|
||||
}
|
||||
|
||||
while (r.r - r.l > 0) {
|
||||
int gen = rels[r.rel].gens[r.r & 1];
|
||||
int next = cosets[r.to * ngens + gen];
|
||||
if (next < 0) break;
|
||||
r.r--;
|
||||
r.to = next;
|
||||
}
|
||||
|
||||
if (r.r - r.l <= 0) {
|
||||
int gen = rels[r.rel].gens[r.l & 1];
|
||||
cosets[r.from * ngens + gen] = r.to;
|
||||
cosets[r.to * ngens + gen] = r.from;
|
||||
|
||||
r.learning = true;
|
||||
return;
|
||||
}
|
||||
|
||||
r.learning = false;
|
||||
}
|
||||
};
|
||||
|
||||
// this sets the inital row in the coset table based on the subgroup generators
|
||||
struct CosetInitializer {
|
||||
int *cosets;
|
||||
|
||||
CosetInitializer(thrust::device_vector<int> &cosets)
|
||||
: cosets(thrust::raw_pointer_cast(cosets.data())) {
|
||||
}
|
||||
|
||||
__device__
|
||||
void operator()(int gen) {
|
||||
cosets[gen] = 0;
|
||||
}
|
||||
};
|
||||
|
||||
// this creates rows for cosets by index of each relation table
|
||||
struct RowGen {
|
||||
Rel *rels;
|
||||
|
||||
int coset;
|
||||
|
||||
RowGen(int coset, thrust::device_vector<Rel> &rels)
|
||||
: coset(coset),
|
||||
rels(thrust::raw_pointer_cast(rels.data())) {}
|
||||
|
||||
__device__
|
||||
Row operator()(int rel) {
|
||||
return Row(rel, coset, rels[rel].mul * 2);
|
||||
}
|
||||
};
|
||||
|
||||
// determines if rows are incomplete; used to remove completed rows
|
||||
struct RowIncomplete {
|
||||
__device__
|
||||
bool operator()(Row r) {
|
||||
return r.r - r.l > 1;
|
||||
}
|
||||
};
|
||||
|
||||
// re-set rows to be learning for a next pass
|
||||
struct Relearn {
|
||||
__device__
|
||||
void operator()(Row &r) {
|
||||
r.learning = true;
|
||||
}
|
||||
};
|
||||
|
||||
// determine if rows are learning. used for exit condition
|
||||
struct Learning {
|
||||
__device__
|
||||
bool operator()(Row r) {
|
||||
return r.learning;
|
||||
}
|
||||
};
|
||||
|
||||
// add a row to the coset table filled with -1
|
||||
void add_row(
|
||||
int ngens,
|
||||
thrust::device_vector<int> &cosets) {
|
||||
cosets.resize(cosets.size() + ngens, -1);
|
||||
};
|
||||
|
||||
// add a new coset to the coset table, picking up where the last call left off.
|
||||
// todo: this part is _real_ slow.
|
||||
bool add_coset(
|
||||
int ngens,
|
||||
int *coset,
|
||||
int *hint,
|
||||
thrust::device_vector<int> &cosets) {
|
||||
*coset = cosets.size() / ngens;
|
||||
|
||||
// todo: this part especially.
|
||||
while (cosets[*hint] >= 0) {
|
||||
*hint = *hint + 1;
|
||||
if (*hint >= cosets.size())
|
||||
return true;
|
||||
}
|
||||
int from = *hint / ngens;
|
||||
int gen = *hint % ngens;
|
||||
|
||||
add_row(ngens, cosets);
|
||||
|
||||
cosets[*hint] = *coset;
|
||||
cosets[*coset * ngens + gen] = from;
|
||||
|
||||
return false;
|
||||
}
|
||||
|
||||
// add a row for each relation table for some coset
|
||||
void gen_rows(
|
||||
int coset,
|
||||
thrust::device_vector<Rel> &rels,
|
||||
thrust::device_vector<Row> &rows) {
|
||||
rows.resize(rows.size() + rels.size());
|
||||
|
||||
thrust::counting_iterator<int> counter(0);
|
||||
thrust::transform(
|
||||
thrust::device,
|
||||
counter, counter + rels.size(),
|
||||
rows.end() - rels.size(),
|
||||
RowGen(coset, rels));
|
||||
}
|
||||
|
||||
// do everything. data is implicitly passed to the device via device_vector.
|
||||
thrust::device_vector<int> solve(
|
||||
int ngens,
|
||||
thrust::device_vector<int> subs,
|
||||
thrust::device_vector<Rel> rels) {
|
||||
|
||||
thrust::device_vector<int> cosets;
|
||||
thrust::device_vector<Row> rows;
|
||||
|
||||
// create the inital row and populate it from subs
|
||||
add_row(ngens, cosets);
|
||||
thrust::for_each(
|
||||
thrust::device,
|
||||
subs.begin(), subs.end(),
|
||||
CosetInitializer(cosets));
|
||||
|
||||
// generate initial relation table rows for coset 0
|
||||
gen_rows(0, rels, rows);
|
||||
|
||||
// these keep track of what progress has been made
|
||||
int coset = 0;
|
||||
int hint = 0;
|
||||
|
||||
// will break out later
|
||||
while (true) {
|
||||
// reset learning=true for all rows.
|
||||
thrust::for_each(
|
||||
thrust::device,
|
||||
rows.begin(),
|
||||
rows.end(),
|
||||
Relearn());
|
||||
|
||||
// create a solver and apply it until nothing is being learned
|
||||
Solver solve(ngens, cosets, rels);
|
||||
while (true) {
|
||||
thrust::for_each(
|
||||
thrust::device,
|
||||
rows.begin(), rows.end(),
|
||||
solve);
|
||||
|
||||
// if not any row is learning, then break.
|
||||
bool r = thrust::any_of(
|
||||
thrust::device,
|
||||
rows.begin(), rows.end(),
|
||||
Learning());
|
||||
if (!r) break;
|
||||
}
|
||||
|
||||
|
||||
// fails if hint passes the end of the table. in that case, break.
|
||||
bool done = add_coset(
|
||||
ngens,
|
||||
&coset, &hint,
|
||||
cosets);
|
||||
if (done) break;
|
||||
|
||||
// generate relation table rows for new coset
|
||||
gen_rows(coset, rels, rows);
|
||||
|
||||
// move completed rows to the end of the list and remove.
|
||||
auto cut = thrust::partition(
|
||||
thrust::device,
|
||||
rows.begin(), rows.end(),
|
||||
RowIncomplete());
|
||||
rows.erase(cut, rows.end());
|
||||
}
|
||||
|
||||
return cosets;
|
||||
}
|
||||
|
||||
|
||||
int main(int argc, const char* argv[]) {
|
||||
Coxeter cox;
|
||||
cox = proc_args(argc, argv);
|
||||
std::vector<int> subs = {};
|
||||
|
||||
auto s = std::chrono::system_clock::now();
|
||||
thrust::host_vector<int> cosets = solve(cox.ngens, subs, cox.rels);
|
||||
auto e = std::chrono::system_clock::now();
|
||||
|
||||
std::chrono::duration<float> diff = e - s;
|
||||
int order = cosets.size() / cox.ngens;
|
||||
|
||||
// type, arg, ngens, time, order
|
||||
std::cout << cox.ngens << ',' << diff.count() << ',' << order << std::endl;
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
39
gpu-slo/run_gpu.sh
Normal file
39
gpu-slo/run_gpu.sh
Normal file
@@ -0,0 +1,39 @@
|
||||
MAIN='./main'
|
||||
|
||||
echo "type,arg,nrels,secs,cosets"
|
||||
|
||||
TYPE=0
|
||||
for ARG in $(seq 25 25 250); do
|
||||
$MAIN $TYPE $ARG
|
||||
done
|
||||
|
||||
TYPE=5
|
||||
for ARG in $(seq 2 5); do
|
||||
$MAIN $TYPE $ARG
|
||||
done
|
||||
|
||||
TYPE=1
|
||||
$MAIN $TYPE
|
||||
|
||||
TYPE=5
|
||||
$MAIN $TYPE 6
|
||||
|
||||
TYPE=2
|
||||
$MAIN $TYPE
|
||||
|
||||
TYPE=5
|
||||
$MAIN $TYPE 7
|
||||
|
||||
TYPE=3
|
||||
$MAIN $TYPE
|
||||
|
||||
TYPE=5
|
||||
$MAIN $TYPE 8
|
||||
$MAIN $TYPE 9
|
||||
|
||||
TYPE=4
|
||||
$MAIN $TYPE
|
||||
|
||||
TYPE=5
|
||||
$MAIN $TYPE 10
|
||||
|
||||
104
gpu-slo/tests.cu
Normal file
104
gpu-slo/tests.cu
Normal file
@@ -0,0 +1,104 @@
|
||||
//#include <cstdio>
|
||||
//#include <cstdlib>
|
||||
//
|
||||
//#include <thrust/host_vector.h>
|
||||
//#include <thrust/device_vector.h>
|
||||
//#include <thrust/sequence.h>
|
||||
//
|
||||
//#define N 50
|
||||
//
|
||||
//__global__
|
||||
//void vector_add(float* out, float* a, float* b, int n) {
|
||||
// for(int i = 0; i < n; i++){
|
||||
// out[i] = a[i] + b[i];
|
||||
// }
|
||||
//}
|
||||
//
|
||||
//int main(){
|
||||
// thrust::host_vector<float> a(N);
|
||||
// thrust::sequence(a.begin(), a.end());
|
||||
//
|
||||
// thrust::host_vector<float> b(N);
|
||||
// thrust::sequence(b.begin(), b.end());
|
||||
// thrust::reverse(b.begin(), b.end());
|
||||
//
|
||||
// for (int i = 0; i < N; ++i) {
|
||||
// printf("%.1f ", a[i]);
|
||||
// } printf("\n");
|
||||
//
|
||||
// for (int i = 0; i < N; ++i) {
|
||||
// printf("%.1f ", b[i]);
|
||||
// } printf("\n");
|
||||
//
|
||||
// thrust::device_vector<float> aD = a;
|
||||
// thrust::device_vector<float> bD = b;
|
||||
// thrust::device_vector<float> outD(N);
|
||||
//
|
||||
// vector_add<<<1, 1>>>(
|
||||
// thrust::raw_pointer_cast(&outD[0]),
|
||||
// thrust::raw_pointer_cast(&aD[0]),
|
||||
// thrust::raw_pointer_cast(&bD[0]),
|
||||
// N);
|
||||
//
|
||||
// thrust::host_vector<float> out = outD;
|
||||
//
|
||||
// for (int i = 0; i < N; ++i) {
|
||||
// printf("%.1f ", out[i]);
|
||||
// } printf("\n");
|
||||
//
|
||||
// return 0;
|
||||
//}
|
||||
|
||||
#include <cstdio>
|
||||
#include <cstdlib>
|
||||
#include <chrono>
|
||||
|
||||
#include <thrust/device_vector.h>
|
||||
#include <thrust/host_vector.h>
|
||||
#include <thrust/sequence.h>
|
||||
|
||||
void add_proc(int *c, int *a, int *b) {
|
||||
*c = *a + *b;
|
||||
}
|
||||
|
||||
void test_proc(){
|
||||
int a = 0;
|
||||
int b = 1;
|
||||
|
||||
auto start = std::chrono::system_clock::now();
|
||||
|
||||
for (int i = 0; i < 1000000; ++i) {
|
||||
add_proc(&a, &a, &b);
|
||||
}
|
||||
|
||||
auto end = std::chrono::system_clock::now();
|
||||
|
||||
std::chrono::duration<float, std::micro> diff = end - start;
|
||||
|
||||
printf("proc: %d: 1B in %.3f micro\n", a, diff.count());
|
||||
}
|
||||
|
||||
__global__
|
||||
void add_gpu(int *c, int *a, int *b) {
|
||||
*c = *a + *b;
|
||||
}
|
||||
|
||||
void test_gpu(){
|
||||
thrust::device_vector<int> vals(2, 0);
|
||||
vals[0] = 0;
|
||||
vals[1] = 1;
|
||||
printf(" gpu: %d: 1B in %.3f micro\n", vals[0], 0.0f);
|
||||
|
||||
int *a = thrust::raw_pointer_cast(&vals[0]);
|
||||
int *b = thrust::raw_pointer_cast(&vals[1]);
|
||||
|
||||
add_gpu<<<1, 1>>>(a, a, a);
|
||||
|
||||
printf(" gpu: %d: 1B in %.3f micro\n", vals[0], 0.0f);
|
||||
}
|
||||
|
||||
int main(int argc, char *argv[]) {
|
||||
test_proc();
|
||||
test_gpu();
|
||||
}
|
||||
|
||||
63
gpu-slo/util.h
Normal file
63
gpu-slo/util.h
Normal file
@@ -0,0 +1,63 @@
|
||||
#pragma once
|
||||
|
||||
#include <thrust/device_vector.h>
|
||||
#include <thrust/host_vector.h>
|
||||
#include <vector>
|
||||
#include <iostream>
|
||||
|
||||
template<class T>
|
||||
std::ostream &operator<<(std::ostream &o, const thrust::host_vector<T> &vec) {
|
||||
if (vec.size() == 0 || vec.size() > 15)
|
||||
return o << "host_vector{size=" << vec.size() << "}";
|
||||
|
||||
o << "[";
|
||||
|
||||
for (int i = 0; i < vec.size() - 1; i++) o << vec[i] << ", ";
|
||||
|
||||
if (vec.size() > 0) o << vec[vec.size() - 1];
|
||||
|
||||
o << "]";
|
||||
|
||||
return o;
|
||||
}
|
||||
|
||||
template<class T>
|
||||
std::ostream &operator<<(std::ostream &o, const thrust::device_vector<T> &vec) {
|
||||
return o << "device_vector{size=" << vec.size() << "}";
|
||||
}
|
||||
|
||||
struct Rel {
|
||||
int gens[2];
|
||||
int mul;
|
||||
};
|
||||
|
||||
struct Coxeter {
|
||||
int ngens;
|
||||
std::vector<Rel> rels;
|
||||
};
|
||||
|
||||
Coxeter make_coxeter(int ngens, const std::vector<Rel> &rels) {
|
||||
int mults[ngens][ngens];
|
||||
|
||||
for (int i = 0; i < ngens; i++) {
|
||||
for (int j = 0; j < ngens; j++) {
|
||||
mults[i][j] = 2;
|
||||
mults[j][i] = 2;
|
||||
}
|
||||
}
|
||||
|
||||
for (const auto &r : rels) {
|
||||
mults[r.gens[0]][r.gens[1]] = r.mul;
|
||||
mults[r.gens[1]][r.gens[0]] = r.mul;
|
||||
}
|
||||
|
||||
std::vector<Rel> res;
|
||||
|
||||
for (int i = 0; i < ngens; i++) {
|
||||
for (int j = i + 1; j < ngens; j++) {
|
||||
res.push_back({i, j, mults[i][j]});
|
||||
}
|
||||
}
|
||||
|
||||
return {ngens, res};
|
||||
}
|
||||
20
hpclog/log-gpu-opt-o3
Normal file
20
hpclog/log-gpu-opt-o3
Normal file
@@ -0,0 +1,20 @@
|
||||
type,arg,nrels,secs,cosets
|
||||
0,25,4,0.38605,2500
|
||||
0,50,4,1.6768,10000
|
||||
0,75,4,7.64476,22500
|
||||
0,100,4,19.5545,40000
|
||||
0,125,4,44.443,62500
|
||||
0,150,4,82.011,90000
|
||||
0,175,4,124.86,122500
|
||||
0,200,4,174.554,160000
|
||||
0,225,4,230.284,202500
|
||||
0,250,4,288.602,250000
|
||||
5,2,2,0.00299317,8
|
||||
5,3,3,0.00585187,48
|
||||
5,4,4,0.0421133,384
|
||||
5,5,5,0.439017,3840
|
||||
1,-1,4,1.63292,14400
|
||||
5,6,6,14.8635,46080
|
||||
2,-1,6,17.6105,51840
|
||||
5,7,7,734.339,645120
|
||||
3,-1,7,6729.78,2903040
|
||||
20
hpclog/log-gpu-slo
Normal file
20
hpclog/log-gpu-slo
Normal file
@@ -0,0 +1,20 @@
|
||||
type,arg,nrels,secs,cosets
|
||||
0,25,4,1.11799,2500
|
||||
0,50,4,4.33001,10000
|
||||
0,75,4,10.4824,22500
|
||||
0,100,4,23.661,40000
|
||||
0,125,4,56.4877,62500
|
||||
0,150,4,103.069,90000
|
||||
0,175,4,163.208,122500
|
||||
0,200,4,246.577,160000
|
||||
0,225,4,354.257,202500
|
||||
0,250,4,494.363,250000
|
||||
5,2,2,0.0894585,8
|
||||
5,3,3,0.0971892,48
|
||||
5,4,4,0.189169,384
|
||||
5,5,5,1.35973,3840
|
||||
1,-1,4,4.76805,14400
|
||||
5,6,6,22.5943,46080
|
||||
2,-1,6,25.1293,51840
|
||||
5,7,7,1350.11,645120
|
||||
3,-1,7,14657.7,2903040
|
||||
20
hpclog/log-gpu-slo-o3
Normal file
20
hpclog/log-gpu-slo-o3
Normal file
@@ -0,0 +1,20 @@
|
||||
type,arg,nrels,secs,cosets
|
||||
0,25,4,1.03598,2500
|
||||
0,50,4,3.89485,10000
|
||||
0,75,4,9.97716,22500
|
||||
0,100,4,22.3504,40000
|
||||
0,125,4,60.0055,62500
|
||||
0,150,4,107.5,90000
|
||||
0,175,4,169.508,122500
|
||||
0,200,4,256.386,160000
|
||||
0,225,4,367.362,202500
|
||||
0,250,4,508.957,250000
|
||||
5,2,2,0.0747127,8
|
||||
5,3,3,0.0833176,48
|
||||
5,4,4,0.166347,384
|
||||
5,5,5,1.24269,3840
|
||||
1,-1,4,4.30961,14400
|
||||
5,6,6,20.8581,46080
|
||||
2,-1,6,23.1169,51840
|
||||
5,7,7,1382.62,645120
|
||||
3,-1,7,14806.1,2903040
|
||||
Reference in New Issue
Block a user