Rename all Doxygen.conf file to doxyfile and distribute them in the Atmel Studio extension.

LUFA/Build/lufa_doxygen.mk

@@ -56,7 +56,7 @@ ERROR_IF_EMPTY   ?= $(if $(strip $($(strip $(1)))), , $(error Makefile $(strip $
 ERROR_IF_NONBOOL ?= $(if $(filter Y N, $($(strip $(1)))), , $(error Makefile $(strip $(1)) option must be Y or N))
 
 # Default values of optionally user-supplied variables
-DOXYGEN_CONF            ?= Doxygen.conf
+DOXYGEN_CONF            ?= doxyfile
 DOXYGEN_FAIL_ON_WARNING ?= Y
 DOXYGEN_OVERRIDE_PARAMS ?= QUIET=YES HTML_EXTRA_STYLESHEET=$(patsubst %/,%,$(LUFA_PATH))/DoxygenPages/Style/Style.css
 

LUFA/DoxygenPages/MigrationInformation.txt

@@ -18,6 +18,10 @@
  *  <b>Non-USB Library Components</b>
  *    - The \c ATTR_NEVER_INLINE macro, erroneously introduced in a previous release has been removed, as it duplicates the existing \c ATTR_NO_INLINE macro.
  *
+ *  <b>Build System</b>
+ *    - The default configuration file for Doxygen is now "doxyfile" rather than "Doxygen.conf", to conform to the Doxygen project's own default file name.
+ *      Set \c DOXYGEN_CONF to override the new default file name.
+ *
  *  \section Sec_Migration130901 Migrating from 130303 to 130901
  *  <b>Non-USB Library Components</b>
  *    - The Board Dataflash \c Dataflash_Init() function now automatically configures the appropriate communication interface.

LUFA/makefile

@@ -10,7 +10,7 @@
 # ---------------------------------------
 
 LUFA_VERSION_NUM         = $(shell grep LUFA_VERSION_STRING $(LUFA_PATH)/Version.h | cut -d'"' -f2)
-EXCLUDE_FROM_EXPORT     := Documentation DoxygenPages CodeTemplates Build StudioIntegration *.conf *.tar *.o *.d *.lss *.lst *.hex *.elf *.hex *.eep *.map *.bin
+EXCLUDE_FROM_EXPORT     := Documentation DoxygenPages CodeTemplates Build StudioIntegration doxyfile *.tar *.o *.d *.lss *.lst *.hex *.elf *.hex *.eep *.map *.bin
 
 # Default target - no default action when attempting to build the core directly
 all: